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Epic Test Code MECPI Methicillin Resistance Gene, Molecular Detection, PCR, Varies

Infectious


Shipping Instructions


1. For shipping information, see Infectious Specimen Shipping Guidelines.

2. Place specimen in a large infectious container and label as an etiologic agent/infectious substance.



Necessary Information


Organism identification and specimen source are required.



Specimen Required


Supplies: Infectious Container, Large (T146)

Container/Tube: Agar slant or other appropriate media

Specimen Volume: Organism in pure culture

Collection Instructions:

1. Perform isolation of bacteria.

2. Organism must be in pure culture, actively growing. Do not submit mixed cultures.


Useful For

Detecting mecA in staphylococcal bacterial isolates

 

Evaluating treatment options when oxacillin or cefoxitin breakpoints are unavailable (eg, certain Staphylococcus species other than Staphylococcus aureus)

 

Predicting antimicrobial resistance when bacterial growth is inadequate for phenotypic antimicrobial susceptibility testing (eg, staphylococcal small colony variants)

 

Assessing discrepancies amongst cefoxitin and oxacillin phenotypic testing results or penicillin-binding protein 2a test results

Method Name

Real-Time Polymerase Chain Reaction (PCR)/Reverse Transcription PCR (RT-PCR)

Reporting Name

Methicillin Resistance Gene, Varies

Specimen Type

Varies

Specimen Minimum Volume

See Specimen Required

Specimen Stability Information

Specimen Type Temperature Time Special Container
Varies Ambient (preferred)
  Refrigerated 

Reject Due To

Agar plate
Mixed culture
Reject

Clinical Information

The presence of mecA has been associated with methicillin resistance in staphylococcal isolates. Rapid identification of mecA in staphylococcal isolates will help in determining which antimicrobial therapy to use when treating infections due to methicillin-resistant Staphylococcus aureus or methicillin-resistant Staphylococcus species other than S aureus.

 

Bacteria can acquire resistance to certain beta-lactam antibiotics through a variety of mechanisms. One such mechanism is the mecA gene. The mecA gene encodes penicillin-binding protein 2a (PBP2a), which has a low affinity for beta-lactam antibiotics. Bacteria expressing this gene can maintain cell wall synthesis even in the presence of beta-lactam antibiotics.

 

Testing of bacterial isolates by molecular methods may be needed when oxacillin or cefoxitin breakpoints are unavailable (eg, certain Staphylococcus species other than S aureus) or when discrepancies exist among cefoxitin and oxacillin phenotypic antimicrobial susceptibility testing results or PBP2a results. Use of this assay may also be helpful when isolates do not grow adequately for phenotypic antimicrobial susceptibility testing (eg, staphylococcal small colony variants).

Reference Values

Not detected

Interpretation

A positive result indicates the presence of the methicillin resistance gene (mecA) in the bacterial isolate.

 

A negative result indicates the absence of detectable DNA in the bacterial isolate.

Cautions

Only pure isolates of staphylococcal species should be tested.

 

This test should be used in conjunction with phenotypic antimicrobial susceptibility tests, when available, and interpreted considering the patient's clinical condition.

 

This US Food and Drug Administration-modified assay will not predict methicillin resistance caused by mechanisms other than mecA. Methicillin resistance due to mecC is not assessed by this assay.

 

False-negative results may occur due to the presence of mecA in quantities lower than the limit of detection of the assay.

 

Mutations or polymorphisms in primer or probe binding regions may affect detection of new or unknown Staphylococcus aureus or methicillin-resistant S aureus variants resulting in a false-negative result.

 

Xpert SA Nasal Complete assay results may sometimes be invalid due to a failed sample processing control, an error, or lack of a result and may require retesting, which can lead to a delay in obtaining final results.

Supportive Data

Staphylococcal bacterial isolates were tested for the presence of mecA by the Cepheid GeneXpert - Xpert SA Nasal Complete compared to Mayo Clinic’s laboratory developed test (LDT) MARP / mecA, Molecular Detection, PCR, Varies. There was 95% or greater concordance for the detection of 25 mecA negative methicillin susceptible Staphylococcus species other than Staphylococcus aureus, 10 mecA negative methicillin susceptible S aureus, and 20 mecA positive methicillin-resistant S aureus. Greater than 95% concordance was achieved for 25 mecA positive methicillin-resistant Staphylococcus species other than S aureus isolates. Additionally, 10 isolates of Staphylococcus saccharolyticus and 10 isolates of small colony variant staphylococci were tested for the presence of mecA by both the Cepheid GeneXpert - Xpert SA Nasal Complete platform and the LDT, yielding 95% or greater correlation.

Day(s) Performed

Monday through Friday

Report Available

2 to 4 days

Specimen Retention Time

30 days

Performing Laboratory

Mayo Clinic Laboratories in Rochester

CPT Code Information

87641

NY State Approved

Yes